I just don't know how to start on cadence errors
OK, so all filtering stuff in ffastrans is done using AVIsynth. There comes a copy of avisynth with ffastrans and a minimal amount of plugins. Basically if you want to go for "the best" framerate conversion, you cannot go with the stuff that comes with ffastrans but you will need to look up whats the current state of frc conversion using avisynth filters in the doom9 forum.
For FRC, you could e.g. use this as a starting point
https://forum.doom9.org/showthread.php?t=113256
Same for faulty cadence stuff, there are filters like e.g.
http://avisynth.nl/index.php/TIVTC/TDecimate but i never did this, so i don't know if this is the right plugin for you to start, better ask in doom9 forum.
But all of that requires lots of engineering, most people spend some years with it before they have really good solutions but if you have enough time to work on it, maybe some months are enough to get to your goal
The way to go for you would be like i said before: check out standalone Avisynth (without using ffastrans), make some friends in the Doom9 forum and create some sophisticated threads there providing example videos and ask for the doom9'ers opinions.
When you are done solving your problem using avisynth standalone, then you can come back to ffastrans in order to put your avisynth solution into an automated workflow.
If you dont know avisynth at all, you neet to get some basics like here:
http://avisynth.nl/index.php/First_script